Yo dude, sorry to hear about your tuning woes. Sounds to me like you have something electrical going on, most likely power or ground. If you don't have one I would recommend getting your hands on a factory wiring diagram, link below will get you one. I would be interested to see what your 12v and 5v reference are doing from various ground points as the motor heats up. Back probing the terminal would be the way to go into the connectors so that you can leave everything plugged in as the motor is running. As the temp increases so does resistance in an electrical circuit. Sensors that are going bad can cause some issues once they get some heat into them. Terminal fretting could also cause some funky things, you typically see it more in your airbag system since those modules are all monitored for resistance but it can still cause issues with engine management. A simple unplug and plug back in will usually resolve the issue, do not use dielectric grease. Do this to your pcm connectors and take apart and clean the ground closest to the pcm. Properly grounding your car will do wonders for performance. Another slight possibility would be pin fitment but this typically causes a hard fault. Fluke has a couple good articles that cover automotive electrical diagnostics that might be helpful..
Hope this helps, Lars
www.fluke.com
www.faxonautoliterature.com
Hope this helps, Lars
Automotive Industry Electrical Resources & Solutions
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2004 Ford Focus Wiring Diagram Manual Original
