Most insurance companies have a special rider on the policy specifically about windshield replacement.
It is a common problem.
Have a specialty place do it. NOT the dealer (who never replaces windshields)
The specialty places do windshields ALL the time. And can do it perfectly in their sleep.
Dealers never do windshields and will mess it up, unless they send it out to the specialty shop anyway...
Call your insurance co about it.
It is not going to cause any problems with insurance.
(though if you get rebates for 'no claim', that will be gone for one cycle of the rebate)