Just thought I would update this since someone else may end up having to search for this in the future. I was able to contact SCT this morning and first they sent me a new stock file which didn't work either, but then they sent me a stock file with PATS disabled and it worked just fine. I even went and had a generic key cut just to make sure and it worked fine. So, while I didn't like not having my car for 18 hours, I saved quite a bit of money by not having to pay dealer price for a new key to be made, I didn't have to pay to have the car towed in for a reflash and I didn't have to pay for a reflash. I cannot speak highly enough about SCT Technical Support. As much as I hate to say it though, our rep here on the forums told me that SCT wouldn't be able to do anything for me and I would have to find someone to write me a stock tune with PATS disable and did not mention that SCT could do it themselves. Thankfully I called them anyways.
No, my avvy isn't a B&W photo....meet Jaz, the car that makes any pic look monochromatic!