Just gotta find that right dealership who's going to help you out. They're out there.
OP, I hope Ford values your loyalty and business enough to really help out. This is my first Ford and despite my issues with MFT I love it. I haven't had any major issues so far with anything else, some things leave some to be desired but mine is a Job 1 build from June 2011, so thus far I'm pleased with how it's performed as a brand new model.
Once upon a time I had:
2012 SGM SEL Sedan Job 1 BD 6/2011
FSWERKS Cool-Flo w/ ITG Filter | FSWERKS Stealth Exhaust | 17x7.5 Axis Sport XMX Graphite wheels | Eibach Sportlines on Ti Handling Pkg bits