Bearing and Seal Assembly in the front and Struts replaced - Fixed all grinding noises.
Reprogrammed PCM and TCM TSB 11-10-2 - Runs better but I still have a rough idle and shuddering, will give it more time though.
Reprogrammed Body Control Module TSB 10-10-1 - Key Fobs now lock instantly.
They couldn't replicate air vent noise.
I still have speaker, headliner, vent, and console rattles and noise. They aren't major but I will see if they get worse